FlashgodVR:
On my end i have a workaround and i think i know what the problem is. The mouse cursor isn’t confined to the game window, as soon as it gets outside of it and you click, the game window gets out of focus, making all the interactable areas and objects inactive.
To get around this very annoying issue, you can bring up the Steam Dashboard - go to Desktop mode - and simply click the game window to make it focused again. Close the Dashboard with the controller button and the cockpit will be clickable again. Until it happens again…
I just made a report here outside of the VR topic. So far it seems random to me when then mouse can escape. I saw it sticking until I ended a flight and then it was unbounded.
Mouse Can Leave Primary Monitor - Bug Reporting Hub / Hardware & Peripherals - Microsoft Flight Simulator Forums